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Table 1 The CRGs and their developed scoring methods in HCC

From: Cuproplasia and cuproptosis in hepatocellular carcinoma: mechanisms, relationship and potential role in tumor microenvironment and treatment

Researchers

CRGs

The Highlights

References

Zhen Zhang and his colleagues

FDX1 and related genes(ALDH5A1, CAT, EHHADH, and SLC27A)

CRRS: The high CRRS group showed lower survival and increased tumor immune infiltration

[10]

Lei Ding and his colleagues

CDKN2A, DLAT, DLD, FDX1, GLS, LIAS, LIPT1, MTF1, PDHA1, and PDHB

1. Three subtypes of cuproptosis were validated;

2. CRGPI: could be used as a potential biomarker for prognosis and immunotherapy in HCC patients

[112]

Zhiqiang Liu and his colleagues

ATP7A, ATP7B, DBT, DLAT, DLD, DLST, FDX1, GCSH, LIAS, LIPT1, PDHA1, PDHB, and SLC31A1

1. Three subgroups of patients based on CRGs were revealed;

2. A cuproptosis-related prognostic risk model was built to predict prognosis

[113]

Jie Fu and his colleagues

ATP7A, ATP7B, CDKN2A, DLAT, DLD, FDX1, GCSH, GLS, LIAS, LIPT1, LIPT2, MPC1, MTF1, PDHA1, PDHB, SLC31A1

1. Three distinct CRGs expression patterns were identified;

2. CRRS was established to predict the prognosis, the immune microenvironment, and expression of immune checkpoint molecules

[111]

Tianhao Cong and his colleagues

Cuproptosis-related ICGs (BTN2A1, BTNL9, CD276, CD40LG, LGALS9, SIRPA, TNFRSF4)

Cuproptosis-related ICGs were developed to predict the prognosis and immune response of HCC patients

[114]

Xi Chen and his colleagues

ATP7A, ATP7B, BAD, PDHA1, CCS, CDKN2A, DLAT, DLD, FDX1, GLS, LIAS, LIPT1, MTF1, MTOR, NRF2, PDHB, and SLC31A1

1. Three cuproptosis subtypes were identified;

2. Cuproptosis signature has been built containing five cuproptosis-associated genes: CLEC3B, CFH, HPR, LAMB1, and PFKFB3

[101]

  1. ALDH5A1 aldehyde dehydrogenase 5 family member A1, ATP7A ATPase copper transporting alpha, ATP7B ATPase copper transporting beta, BAD BCL2 associated agonist of cell death, BTNL9 butyrephilin like 9, BTN2A1 butrophilin subfamily 2 member A1, CAT catalase, CCS copper chaperone for superoxide dismutase, CD40LG CD40 antigen ligand, CDKN2A cyclin dependent kinase inhibitor 2A, CRG cuproptosis-related gene, CRRS cuproptosis-related risk score, CRGPI cuproptosis-related gene prognostic index, DBT dihydrolipoamide branched chain transacylase E2, DLAT dihydrolipoamide S-acetyltransferase, DLST dihydrolipoamide S-succinyltransferase, DLD dihydrolipoamide dehydrogenase, EHHADH enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase, FDX1 ferredoxin 1, GCSH glycine cleavage system protein H, GLS glutaminase, ICG immune checkpoint genes, LIAS lipoic acid synthetase, LGALS9 galectin 9, SLC27A solute carrier family 27A, LIPT1 lipoyltransferase 1, MTF1 metal regulatory transcription factor 1, MTOR mammalian target of rapamycin, MPC1 mitochondrial pyruvate carrier 1, NRF2 Nuclear factor erythroid2-related factor 2, PDHA1 pyruvate dehydrogenase E1 subunit alpha 1, PDHB pynuvate dehydrogenase E1 subunit beta, SIRPA signal regulatory protein alpha, SLC31A1 solute carrier family 31 member 1, TNFRSF4 TNF receptor superfamily member 4